Basic Information
Locus ID:
gene-QOZ80_9BG0701660
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
FFAT motif binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 12102437 | 12102973 | + | gene-QOZ80_9BG0701660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 20,390.89 Da | 36.89 | 92.98 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 29 | 121 | 2.0E-12 | IPR000535 |
| SUPERFAMILY | SSF49354 | PapD-like | 20 | 156 | 1.39E-17 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 19 | 149 | 2.6E-19 | IPR013783 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 26 | 145 | 15.215056 | IPR000535 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039801977.1 | U-box domain-containing protein 51-like isoform X5 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9WQ16 | MSP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0390920, gene-QOZ80_5BG0439740 ... |