Basic Information
Locus ID:
gene-QOZ80_9BG0700790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 9867493 | 9868634 | - | gene-QOZ80_9BG0700790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 18,843.15 Da | 39.22 | 75.19 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 36 | 75 | 1.6E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 11 | 154 | 1.03E-18 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 160 | 3.9E-30 | IPR015943 |
| SMART | SM00320 | WD40_4 | 34 | 75 | 0.065 | IPR001680 |
| SMART | SM00320 | WD40_4 | 79 | 115 | 3.2 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025826918.1 | uncharacterized protein LOC112902194 isoform X4 [Panicum hallii] | 0 |
| TrEMBL | A0A5J9WPG9 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01397 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology