Basic Information
Locus ID:
gene-QOZ80_9BG0698860
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 4906003 | 4906902 | - | gene-QOZ80_9BG0698860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 33,874.97 Da | 66.02 | 69.80 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 45 | 1.2E-5 | IPR001810 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 219 | 279 | 2.0E-6 | IPR005174 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 63 | 5.1E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 52 | 4.4E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 157 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022684918.1 | uncharacterized protein LOC111258233 [Setaria italica] | 0 |
| TrEMBL | A0A3L6PEX6 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM10G11190 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 15 | AH04.349, AH04.350, AH04.351, AH04.352, BH04.319, BH09.47 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_9AG0675010, gene-QOZ80_9AG0675020 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G094900, gene-BS78_K254200 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G021150 |
| Poaceae | Triticum aestivum | 1 | TraesCS7D02G214100.1.cds1 |