Basic Information
Locus ID:
gene-QOZ80_9BG0698140
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 4250505 | 4252066 | + | gene-QOZ80_9BG0698140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 46,531.81 Da | 33.33 | 93.70 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 5 | 166 | 9.41067E-69 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 3 | 178 | 1.3E-55 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 267 | 383 | 1.8E-26 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 38 | 262 | 9.51E-55 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 239 | 410 | 2.86E-41 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 259 | 413 | 2.6E-45 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 2 | 176 | 1.1E-47 | - |
| SMART | SM00220 | serkin_6 | 249 | 412 | 6.1E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 131 | 413 | 21.62998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 295 | 307 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_039838728.1 | L-type lectin-domain containing receptor kinase SIT2-like [Panicum virgatum] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5UY43 | L-type lectin-domain containing receptor kinase IV.2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0021168 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9BG0698140 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114078022 |