Basic Information
Locus ID:
gene-QOZ80_9BG0695810
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 2715864 | 2723810 | + | gene-QOZ80_9BG0695810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 71,321.09 Da | 35.38 | 86.44 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 350 | 627 | 1.2462E-51 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 550 | 587 | 7.8E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 350 | 375 | 0.16 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 464 | 503 | 2.5E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 424 | 459 | 2.2E-7 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 40 | 164 | 3.4E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 182 | 4.01E-23 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 191 | 307 | 2.17E-13 | IPR008962 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 350 | 625 | 1.98E-63 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 17 | 180 | 6.8E-23 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 187 | 325 | 1.2E-16 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 344 | 630 | 8.1E-88 | IPR015943 |
| SMART | SM00320 | WD40_4 | 463 | 503 | 5.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 506 | 545 | 20.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 548 | 587 | 1.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 590 | 628 | 420.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 340 | 375 | 0.49 | IPR001680 |
| SMART | SM00320 | WD40_4 | 420 | 459 | 6.4E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 378 | 417 | 0.061 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 470 | 503 | 10.732868 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 555 | 587 | 11.181047 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 174 | 12.075397 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 470 | 512 | 13.215325 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 555 | 587 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 194 | 324 | 8.70179 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 427 | 459 | 14.485216 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 427 | 459 | 11.971952 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 532 | 554 | 8.67045 | IPR001680 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 446 | 460 | 1.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 490 | 504 | 1.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 574 | 588 | 1.3E-6 | IPR020472 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79990.2 | structural molecules. | 0 |
| RefSeq | XP_039823347.1 | receptor like protein kinase S.2-like isoform X3 [Panicum virgatum] | 0 |
| Q9CAA0 | Coatomer subunit beta'-1 OS=Arabidopsis thaliana OX=3702 GN=At1g79990 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0PCA0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG173301 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_8BG0645030, gene-QOZ80_9AG0672230 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049245 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G005400, Tel3E01G846300 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG003560 |
| Poaceae | Triticum aestivum | 6 | TraesCS1B02G294900.1, TraesCS1D02G284700.1 ... |