Basic Information
Locus ID:
gene-QOZ80_9BG0693680
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 408690 | 411695 | - | gene-QOZ80_9BG0693680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.42 | 95,124.89 Da | 59.96 | 67.46 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 697 | 730 | 0.26 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 519 | 553 | 7.2E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 559 | 595 | 7.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 411 | 442 | 2.9E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 404 | 734 | 8.99E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 395 | 742 | 9.4E-62 | IPR015943 |
| SMART | SM00320 | WD40_4 | 690 | 731 | 0.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 649 | 689 | 4.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 556 | 595 | 8.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 597 | 636 | 3.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 404 | 443 | 4.0E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 514 | 553 | 2.6E-10 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 521 | 562 | 16.791073 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 411 | 444 | 14.451798 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 562 | 596 | 12.881143 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 411 | 444 | 11.945589 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 562 | 596 | 10.706503 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 521 | 556 | 13.369217 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 540 | 554 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 540 | 554 | 2.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 582 | 596 | 2.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 430 | 444 | 2.9E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 783 | 838 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 159 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37670.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_025828580.1 | uncharacterized protein LOC112903529 [Panicum hallii] | 0 |
| Q5JSH3 | WD repeat-containing protein 44 OS=Homo sapiens OX=9606 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SUJ1 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_51839 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology