halophFGD

Basic Information

Locus ID: gene-QOZ80_9AG0692750

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: Wall-associated receptor kinase galacturonan-binding

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9A	44919759	44920763	+	gene-QOZ80_9AG0692750

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.94	37,283.64 Da	40.39	88.95	-0.18

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	42	320	7.8E-40	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	20	318	1.08E-64	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	115	327	1.3E-48	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	13	114	4.2E-20	-
SMART	SM00220	serkin_6	38	326	3.3E-15	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	38	325	30.859482	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	44	66	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G25490.1	Protein kinase family protein.
RefSeq	XP_034568903.1	wall-associated receptor kinase 2-like isoform X2 [Setaria viridis]
Swiss-Prot	Q9LSV3	Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana OX=3702 GN=WAKL16 PE=3 SV=1
TrEMBL	A0A059Q2B2	Wall-associated receptor kinase OS=Saccharum hybrid cultivar R570 OX=131158 GN=SHCRBa_019_G01_F_160 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	4	AH04.2283, BH04.2243, CH03.2334, CH04.2670
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_9AG0692750, gene-QOZ80_9AG0692840 ... gene-QOZ80_9AG0692860, gene-QOZ80_9BG0718700, gene-QOZ80_9BG0718730
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.2HG0103900.1
Poaceae	Oryza coarctata	4	Oco08G001920, Oco08G001950, Oco18G001800, Oco21G009920
Poaceae	Oryza sativa	10	ChrSy.fgenesh.mRNA.14, LOC_Os04g14304.1, LOC_Os11g46860.1 ... LOC_Os11g46870.1, LOC_Os11g46880.1, LOC_Os11g46900.1, LOC_Os11g46950.1, LOC_Os11g47110.1, LOC_Os11g47140.1, LOC_Os11g47150.1
Poaceae	Paspalum vaginatum	17	gene-BS78_05G102300, gene-BS78_05G242700, gene-BS78_K099700 ... gene-BS78_05G266800, gene-BS78_05G269800, gene-BS78_05G271400, gene-BS78_05G272500, gene-BS78_05G272800, gene-BS78_K099900, gene-BS78_K100000, gene-BS78_K171900, gene-BS78_K172000, gene-BS78_K172100, gene-BS78_K196500, gene-BS78_K197800, gene-BS78_K219000, gene-BS78_K235400
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0205048, Pt_Chr0205049, Pt_Chr0205050
Poaceae	Sporobolus alterniflorus	3	Chr07G013790, Chr0G006760, Chr31G008600
Poaceae	Thinopyrum elongatum	1	Tel2E01G159400
Poaceae	Triticum dicoccoides	7	gene_TRIDC2AG008000, gene_TRIDC2AG008010 ... gene_TRIDC2AG008170, gene_TRIDC2BG005430, gene_TRIDC2BG009420, gene_TRIDC2BG009570, gene_TRIDC2BG009730
Poaceae	Triticum aestivum	8	TraesCS2A02G071800.1, TraesCS2A02G071900.1 ... TraesCS2B02G087300.1, TraesCS2B02G088100.1, TraesCS2D02G070600.1, TraesCS2D02G070700.1, TraesCS2D02G070800.1, TraesCSU02G009300.1
Poaceae	Zoysia japonica	3	nbis-gene-18470, nbis-gene-18479, nbis-gene-37655