HalophFGD

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Basic Information
Locus ID: gene-QOZ80_9AG0690910
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr9A 42808901 42814319 + gene-QOZ80_9AG0690910
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.31 51,815.18 Da 53.18 100.68 0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52047 RNI-like 139 382 2.04E-9 -
SUPERFAMILY SSF81383 F-box domain 12 57 4.32E-8 IPR036047
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 138 406 1.0E-7 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G13965.1 Protein with RNI-like/FBD-like domains. 0
RefSeq XP_002439645.2 F-box/LRR-repeat protein At4g14096 [Sorghum bicolor] 0
Swiss-Prot Q9FJU2 Putative FBD-associated F-box protein At5g56700 OS=Arabidopsis thaliana OX=3702 GN=At5g56700 PE=2 SV=2 0
TrEMBL A0A5J9UKE3 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26323 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 2 AsparagusV1_03.840.V1.1, AsparagusV1_03.841.V1.1
Poaceae Echinochloa crus-galli 16 AH05.2790, AH09.546, AH09.573, AH09.577, BH04.1290, BH09.662 ...
BH04.2137, BH04.2144, CH03.599, CH05.2891, CH05.2893, CH09.2376, CH09.2706, CH09.2708, CH09.2709, CH09.665
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_2AG0114350, gene-QOZ80_4AG0324470 ...
gene-QOZ80_5AG0376320, gene-QOZ80_5BG0423540, gene-QOZ80_9AG0690900, gene-QOZ80_9AG0690910, gene-QOZ80_9BG0715310, gene-QOZ80_9BG0717210, gene-QOZ80_9BG0717220
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.2HG0106560.1.CDS1 ...
HORVU.MOREX.r3.2HG0106730.1.CDS1, HORVU.MOREX.r3.2HG0194620.1.CDS1, HORVU.MOREX.r3.2HG0200500.1.CDS1, HORVU.MOREX.r3.2HG0200520.1.CDS1, HORVU.MOREX.r3.2HG0200660.1.CDS1, HORVU.MOREX.r3.3HG0313980.1.CDS1
Poaceae Lolium multiflorum 37 gene-QYE76_009133, gene-QYE76_018843, gene-QYE76_019818 ...
gene-QYE76_026968, gene-QYE76_028965, gene-QYE76_036425, gene-QYE76_038437, gene-QYE76_038440, gene-QYE76_038449, gene-QYE76_038450, gene-QYE76_038454, gene-QYE76_038459, gene-QYE76_039080, gene-QYE76_039893, gene-QYE76_039896, gene-QYE76_041884, gene-QYE76_047124, gene-QYE76_047126, gene-QYE76_047128, gene-QYE76_047130, gene-QYE76_047133, gene-QYE76_047135, gene-QYE76_047140, gene-QYE76_047142, gene-QYE76_047145, gene-QYE76_047147, gene-QYE76_047150, gene-QYE76_047154, gene-QYE76_047158, gene-QYE76_049310, gene-QYE76_049311, gene-QYE76_057702, gene-QYE76_057707, gene-QYE76_065808, gene-QYE76_065812, gene-QYE76_065819, gene-QYE76_065824
Poaceae Oryza coarctata 1 Oco08G002160
Poaceae Oryza sativa 6 LOC_Os04g19810.1, LOC_Os04g19920.1, LOC_Os05g39300.1 ...
LOC_Os11g33180.1, LOC_Os11g33210.1, LOC_Os11g42310.1
Poaceae Paspalum vaginatum 5 gene-BS78_04G092800, gene-BS78_05G225800 ...
gene-BS78_05G226000, gene-BS78_09G116200, gene-BS78_09G116400
Poaceae Puccinellia tenuiflora 8 Pt_Chr0300409, Pt_Chr0300411, Pt_Chr0300412, Pt_Chr0300435 ...
Pt_Chr0305575, Pt_Chr0305577, Pt_Chr0404384, Pt_Chr0500148
Poaceae Sporobolus alterniflorus 4 Chr09G009220, Chr16G004370, Chr16G004500, Chr26G003030
Poaceae Thinopyrum elongatum 8 Tel1E01G132600, Tel2E01G165600, Tel2E01G790600 ...
Tel2E01G829500, Tel2E01G829900, Tel2E01G830400, Tel2E01G830600, Tel3E01G721600
Poaceae Triticum dicoccoides 13 gene_TRIDC1BG010830, gene_TRIDC2AG008420 ...
gene_TRIDC2AG068990, gene_TRIDC2AG069110, gene_TRIDC2BG009780, gene_TRIDC2BG071530, gene_TRIDC2BG074610, gene_TRIDC2BG074700, gene_TRIDC2BG074780, gene_TRIDC2BG074800, gene_TRIDC2BG074810, gene_TRIDC2BG074830, gene_TRIDC2BG074860
Poaceae Triticum aestivum 27 TraesCS1D02G064800.1, TraesCS2A02G075700.1.cds1 ...
TraesCS2A02G075900.1.cds1, TraesCS2A02G468600.1, TraesCS2A02G489200.1.cds1, TraesCS2B02G090500.1.cds1, TraesCS2B02G491500.1, TraesCS2B02G517100.1.cds1, TraesCS2B02G517300.1.cds1, TraesCS2B02G517900.1.cds1, TraesCS2B02G518200.1, TraesCS2D02G074600.1.cds1, TraesCS2D02G489500.1.cds1, TraesCS2D02G489800.1.cds1, TraesCS2D02G490200.1.cds1, TraesCS3A02G455300.1, TraesCS3A02G455400.1, TraesCS3B02G444700.1, TraesCS3B02G445800.1.cds1, TraesCS3B02G494100.1, TraesCS3B02G494400.1.cds1, TraesCS3B02G494900.1.cds1, TraesCS3B02G495000.1.cds1, TraesCS3B02G495100.1.cds1, TraesCS3D02G405600.1.cds1, TraesCS3D02G448200.1.cds1, TraesCS3D02G448300.1.cds1
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