Basic Information
Locus ID:
gene-QOZ80_9AG0689790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 40897180 | 40898348 | + | gene-QOZ80_9AG0689790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 38,265.44 Da | 41.34 | 78.31 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 74 | 193 | 4.48699E-23 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 203 | 305 | 8.3E-19 | IPR000210 |
| Pfam | PF00917 | MATH domain | 80 | 195 | 3.7E-5 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 70 | 194 | 3.76E-26 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 202 | 305 | 4.71E-22 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 73 | 196 | 2.1E-24 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 200 | 345 | 2.5E-35 | IPR011333 |
| SMART | SM00225 | BTB_4 | 198 | 308 | 1.5E-15 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 202 | 264 | 13.260207 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 73 | 199 | 14.38211 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039822900.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V5N0 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_23123 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0689790, gene-QOZ80_9BG0714620 |