Basic Information
Locus ID:
gene-QOZ80_9AG0689740
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 40840023 | 40841132 | + | gene-QOZ80_9AG0689740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 40,755.89 Da | 36.11 | 79.00 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 28 | 162 | 1.48006E-31 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 199 | 305 | 1.8E-23 | IPR000210 |
| Pfam | PF00917 | MATH domain | 53 | 163 | 1.5E-5 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 180 | 306 | 5.69E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 167 | 5.56E-34 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 306 | 369 | 7.0E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 177 | 301 | 3.3E-34 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 165 | 5.3E-30 | IPR008974 |
| SMART | SM00225 | BTB_4 | 201 | 306 | 9.0E-28 | IPR000210 |
| SMART | SM00061 | math_3 | 32 | 143 | 4.2E-4 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 161 | 23.331434 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 201 | 271 | 17.541382 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_051177205.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9ULR7 | Speckle-type POZ protein-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26598 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0689740, gene-QOZ80_9BG0714590 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G215100 |