Basic Information
Locus ID:
gene-QOZ80_9AG0688840
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 39347968 | 39370913 | - | gene-QOZ80_9AG0688840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 91,242.20 Da | 39.64 | 77.58 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 309 | 342 | 1.9502E-4 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 40 | 102 | 1.4E-10 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 430 | 636 | 4.6E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 633 | 6.01E-63 | IPR011009 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 273 | 346 | 2.83E-9 | IPR009030 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 259 | 346 | 6.3E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 507 | 682 | 2.7E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 506 | 4.1E-26 | - |
| SMART | SM00220 | serkin_6 | 427 | 686 | 1.2E-31 | IPR000719 |
| SMART | SM00179 | egfca_6 | 309 | 351 | 1.5E-4 | IPR001881 |
| SMART | SM00181 | egf_5 | 312 | 351 | 0.21 | IPR000742 |
| SMART | SM00181 | egf_5 | 261 | 308 | 0.57 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 686 | 33.078522 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 309 | 334 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_012702453.2 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VQ26 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10919 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0688840 |
| Poaceae | Paspalum vaginatum | 12 | gene-BS78_05G248600, gene-BS78_05G248800, gene-BS78_K280400 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262530_P001 |