halophFGD

Basic Information

Locus ID: gene-QOZ80_9AG0686430

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: BTB/POZ domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9A	34989229	34993390	-	gene-QOZ80_9AG0686430

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.09	17,993.33 Da	28.86	87.77	-0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	21	58	8.45259E-4	IPR002083
SUPERFAMILY	SSF49599	TRAF domain-like	18	62	1.18E-5	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	41	134	5.6E-12	IPR011333

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
RefSeq	XP_039841250.1	BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum]
Swiss-Prot	Q7T330	Speckle-type POZ protein OS=Danio rerio OX=7955 GN=spop PE=2 SV=1
TrEMBL	A0A5J9W8S5	BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04585 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	1	BH05.4338
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_9AG0686430
Poaceae	Lolium multiflorum	1	gene-QYE76_036200
Poaceae	Triticum dicoccoides	1	gene_TRIDC7BG059010