Basic Information
Locus ID:
gene-QOZ80_9AG0686270
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 34777218 | 34778197 | - | gene-QOZ80_9AG0686270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 33,706.86 Da | 37.98 | 92.54 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 73 | 249 | 1.3E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 73 | 268 | 1.28E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 42 | 271 | 1.2E-24 | - |
| SMART | SM00220 | serkin_6 | 3 | 249 | 0.001 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 249 | 13.700807 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46070.1 | mitogen-activated protein kinase 12. Encodes a MAP kinase protein. MPK12 interacts with the IBR5 protein phosphatase in vitro and in vivo, and it can be dephosphorylated and inactivated by IBR5. MPK12 appears to be a negative regulator of auxin signlaing. MPK12 RNAi lines are hypersensitive to auxin in root elongation and transcriptional response assays, but they appear to have normal sensitivity to ABA. MPK12 is a nuclear protein and its kinase activity is increased following auxin treatment. MPK12 transcripts are widely expressed in seedlings, but MPK12 expression is stronger in guard cells than in other cell types in mature plants. | 0 |
| RefSeq | XP_002462879.1 | putative cyclin-dependent kinase F-2 [Sorghum bicolor] | 0 |
| A2X6X1 | Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9TBA1 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42057 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH06.371 |
| Poaceae | Eleusine coracana subsp. coracana | 10 | gene-QOZ80_1BG0063630, gene-QOZ80_5AG0371540 ... |
| Poaceae | Sporobolus alterniflorus | 4 | Chr04G013650, Chr12G018460, Chr18G010490, Chr22G007160 |