Basic Information
Locus ID:
gene-QOZ80_9AG0685400
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 33220638 | 33221303 | - | gene-QOZ80_9AG0685400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 24,839.52 Da | 37.48 | 101.95 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 42 | 7.0E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 138 | 219 | 1.96E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 52 | 2.22E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 46 | 5.3E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 89 | 221 | 5.6E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 10 | 49 | 6.8E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 49 | 10.186324 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56810.2 | - | 0 |
| RefSeq | XP_004979479.1 | FBD-associated F-box protein At5g18780 isoform X2 [Setaria italica] | 0 |
| Q9FJT2 | Putative F-box/FBD/LRR-repeat protein At5g56810 OS=Arabidopsis thaliana OX=3702 GN=At5g56810 PE=4 SV=1 | 0 | |
| TrEMBL | A0A5J9UM69 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_27303 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology