Basic Information
Locus ID:
gene-QOZ80_9AG0684800
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 32079263 | 32090726 | + | gene-QOZ80_9AG0684800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 126,386.60 Da | 44.95 | 80.87 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 204 | 532 | 5.90465E-167 | - |
| CDD | cd00121 | MATH | 63 | 179 | 7.39945E-36 | IPR002083 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 890 | 1074 | 1.1E-51 | IPR029346 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 631 | 880 | 7.6E-75 | IPR024729 |
| Pfam | PF00917 | MATH domain | 68 | 188 | 6.0E-20 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 206 | 527 | 2.9E-47 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 201 | 557 | 1.82E-97 | IPR038765 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 62 | 194 | 5.56E-40 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 691 | 805 | 4.0E-42 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 59 | 202 | 2.2E-51 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 806 | 903 | 4.2E-27 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 203 | 531 | 2.4E-90 | - |
| SMART | SM00061 | math_3 | 63 | 167 | 7.0E-19 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 206 | 530 | 40.632568 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 61 | 186 | 37.778206 | IPR002083 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 207 | 222 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 446 | 463 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 59 | - | - |
| Coils | Coil | Coil | 546 | 566 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_034607285.1 | ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Setaria viridis] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9UMG0 | ubiquitinyl hydrolase 1 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27399 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology