Basic Information
Locus ID:
gene-QOZ80_9AG0683360
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 29480033 | 29487215 | + | gene-QOZ80_9AG0683360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 68,324.72 Da | 42.08 | 74.35 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 21 | 79 | 2.3E-11 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 309 | 584 | 2.9E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 588 | 3.51E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 386 | 594 | 5.8E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 281 | 385 | 1.7E-21 | - |
| SMART | SM00220 | serkin_6 | 306 | 589 | 4.1E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 306 | 586 | 32.597965 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 433 | 445 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 312 | 334 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16130.1 | wall associated kinase-like 2. wall-associated kinase like | 0 |
| RefSeq | XP_004980706.3 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q7X8C5 | Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana OX=3702 GN=WAKL2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UPI0 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27646 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0683360, gene-QOZ80_9BG0709040 |