Basic Information
Locus ID:
gene-QOZ80_9AG0683250
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Fasciclin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 29155089 | 29156780 | + | gene-QOZ80_9AG0683250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 42,803.27 Da | 44.40 | 90.50 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 201 | 332 | 4.9E-13 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 43 | 119 | 1.2E-4 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 37 | 132 | 5.76E-13 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 195 | 332 | 2.09E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 29 | 166 | 5.1E-8 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 197 | 332 | 2.3E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 227 | 333 | 1.0E-10 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 31 | 160 | 9.326416 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 188 | 330 | 10.497044 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 377 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_034578944.1 | fasciclin-like arabinogalactan protein 2 [Setaria viridis] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9THU6 | Fasciclin-like arabinogalactan protein 2 OS=Eragrostis curvula OX=38414 GN=EJB05_44488 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology