Basic Information
Locus ID:
gene-QOZ80_9AG0681840
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 25901293 | 25902990 | - | gene-QOZ80_9AG0681840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 57,427.33 Da | 29.23 | 90.91 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 406 | 473 | 6.9E-12 | IPR032838 |
| Pfam | PF00092 | von Willebrand factor type A domain | 69 | 230 | 8.7E-20 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 65 | 236 | 4.06E-28 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 69 | 237 | 1.0E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 67 | 236 | 8.0E-20 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 69 | 235 | 18.107147 | IPR002035 |
| Coils | Coil | Coil | 383 | 403 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_002439029.2 | uncharacterized protein LOC8064996 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9URA6 | VWFA domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_28082 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology