Basic Information
Locus ID:
gene-QOZ80_9AG0681630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 25190473 | 25192158 | + | gene-QOZ80_9AG0681630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 56,253.00 Da | 29.45 | 89.06 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 64 | 211 | 1.1E-17 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 397 | 464 | 2.9E-14 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 60 | 211 | 3.76E-27 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 64 | 232 | 7.7E-37 | IPR036465 |
| SMART | SM00327 | VWA_4 | 62 | 232 | 1.2E-19 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 64 | 239 | 17.578833 | IPR002035 |
| Coils | Coil | Coil | 374 | 394 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_002439029.2 | uncharacterized protein LOC8064996 [Sorghum bicolor] | 0 |
| Q9LTA6 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835AD21 | VWFA domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_058761 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology