Basic Information
Locus ID:
gene-QOZ80_9AG0681210
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 23612171 | 23613805 | + | gene-QOZ80_9AG0681210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 44,406.56 Da | 39.48 | 79.51 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 39 | 158 | 2.75922E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 217 | 323 | 2.4E-16 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 210 | 323 | 9.22E-20 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 36 | 162 | 3.76E-23 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 328 | 398 | 1.5E-12 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 30 | 161 | 9.1E-21 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 205 | 327 | 4.0E-22 | IPR011333 |
| SMART | SM00225 | BTB_4 | 221 | 325 | 9.4E-14 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 221 | 289 | 13.529074 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 157 | 16.146404 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 196 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034579597.1 | BTB/POZ and MATH domain-containing protein 1-like [Setaria viridis] | 0 |
| TrEMBL | A0A5J9UP50 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_28041 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_7AG0554940, gene-QOZ80_7AG0554950 ... |
| Poaceae | Oryza coarctata | 1 | Oco07G002020 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g18830.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G028500 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G001810, Chr28G000690 |