Basic Information
Locus ID:
gene-QOZ80_9AG0681120
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 23313344 | 23315139 | - | gene-QOZ80_9AG0681120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.65 | 45,227.96 Da | 39.90 | 85.30 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 40 | 378 | 1.7E-59 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 279 | 349 | 1.7E-14 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 38 | 382 | 5.97E-54 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 54 | 379 | 3.0E-86 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 278 | 349 | 3.0E-86 | IPR029070 |
| SMART | SM00636 | 2g34 | 37 | 378 | 7.4E-73 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 37 | 395 | 57.237648 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_004979247.1 | chitinase-3-like protein 1 [Setaria italica] | 0 |
| U5N4E3 | Nod factor hydrolase protein 1 OS=Medicago truncatula OX=3880 GN=NFH1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9UQG2 | GH18 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_28010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology