Basic Information
Locus ID:
gene-QOZ80_9AG0680900
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 22675110 | 22690892 | - | gene-QOZ80_9AG0680900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 105,906.17 Da | 47.13 | 80.60 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 732 | 887 | 2.94729E-62 | - |
| Pfam | PF06337 | DUSP domain | 35 | 136 | 3.2E-23 | IPR006615 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 496 | 680 | 3.3E-11 | IPR029346 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 315 | 886 | 9.2E-87 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 13 | 136 | 7.85E-27 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 313 | 889 | 4.12E-110 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 301 | 538 | 2.9E-66 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 6 | 148 | 5.5E-36 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 149 | 235 | 6.9E-13 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 646 | 897 | 6.1E-58 | - |
| SMART | SM00695 | dusp | 31 | 138 | 1.7E-30 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 12 | 135 | 19.131096 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 315 | 889 | 55.853512 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 831 | 848 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 316 | 331 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_025827282.1 | ubiquitin carboxyl-terminal hydrolase 5 [Panicum hallii] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9UP27 | Ubiquitin carboxyl-terminal hydrolase OS=Eragrostis curvula OX=38414 GN=EJB05_27992 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology