Basic Information
Locus ID:
gene-QOZ80_9AG0679710
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 15413133 | 15414248 | + | gene-QOZ80_9AG0679710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 40,055.89 Da | 36.87 | 64.74 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 167 | 213 | 2.8E-13 | IPR006652 |
| Pfam | PF00646 | F-box domain | 17 | 49 | 3.6E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 124 | 165 | 1.4E-4 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 92 | 358 | 5.36E-46 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 55 | 6.28E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 58 | 291 | 1.8E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 292 | 369 | 3.9E-6 | IPR015915 |
| SMART | SM00612 | kelc_smart | 229 | 278 | 8.7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 179 | 228 | 5.0E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 130 | 178 | 2.7E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_004978976.1 | F-box/kelch-repeat protein At2g44130 [Setaria italica] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5VAS5 | F-box/kelch-repeat protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016726 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology