Basic Information
Locus ID:
gene-QOZ80_9AG0677940
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
MSP (Major sperm protein) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 10453292 | 10456513 | + | gene-QOZ80_9AG0677940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 59,605.87 Da | 40.74 | 96.14 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 372 | 468 | 4.6E-13 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 163 | 346 | 6.1E-33 | IPR000719 |
| SUPERFAMILY | SSF49354 | PapD-like | 367 | 501 | 2.38E-18 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 102 | 388 | 1.91E-59 | IPR011009 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 367 | 493 | 9.3E-20 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 172 | 4.7E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 366 | 2.8E-49 | - |
| Gene3D | G3DSA:3.30.70.100 | - | 1 | 73 | 2.6E-13 | - |
| SMART | SM00220 | serkin_6 | 118 | 355 | 9.1E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 65 | 352 | 24.795996 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 371 | 490 | 16.592022 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| Coils | Coil | Coil | 76 | 103 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_039801977.1 | U-box domain-containing protein 51-like isoform X5 [Panicum virgatum] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A834ZUW9 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_067513 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0390920, gene-QOZ80_5BG0439740 ... |