Basic Information
Locus ID:
gene-QOZ80_9AG0675300
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 4543255 | 4548324 | - | gene-QOZ80_9AG0675300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 51,696.57 Da | 40.76 | 87.58 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 333 | 433 | 8.3E-14 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 35 | 300 | 6.0E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 304 | 2.7E-69 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 328 | 449 | 1.26E-21 | IPR008962 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 108 | 3.8E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 326 | 3.0E-49 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 327 | 450 | 5.3E-25 | IPR013783 |
| SMART | SM00220 | serkin_6 | 34 | 300 | 8.0E-37 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 330 | 448 | 18.143841 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 305 | 34.435383 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61480.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037467231.1 | putative receptor-like protein kinase At4g00960 isoform X4 [Triticum dicoccoides] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A5J9UTW3 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_29399 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH05.3525, CH04.920, CH05.3680, Contig522.28 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0380720, gene-QOZ80_5BG0439080 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0225170.1, HORVU.MOREX.r3.7HG0748020.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_036867, gene-QYE76_036876, gene-QYE76_036884 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G051900, gene-BS78_08G093000 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401585 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G157900, Tel7E01G940400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG004390, gene_TRIDC7AG075260 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS3A02G073900.1, TraesCS3D02G522300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb164620_P001 |