Basic Information
Locus ID:
gene-QOZ80_9AG0675020
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 4170111 | 4171250 | - | gene-QOZ80_9AG0675020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 43,655.56 Da | 49.43 | 83.11 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 14 | 55 | 2.0E-6 | IPR001810 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 296 | 332 | 9.7E-6 | IPR005174 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 72 | 1.2E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 14 | 55 | 1.0E-7 | - |
| SMART | SM00256 | fbox_2 | 17 | 58 | 7.1E-4 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039779005.1 | probable F-box protein At1g44080 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9UUA7 | DUF295 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_29430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 15 | AH04.349, AH04.350, AH04.351, AH04.352, BH04.319, BH09.47 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_9AG0675010, gene-QOZ80_9AG0675020 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G094900, gene-BS78_K254200 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G021150 |
| Poaceae | Triticum aestivum | 1 | TraesCS7D02G214100.1.cds1 |