Basic Information
Locus ID:
gene-QOZ80_9AG0672230
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 2197664 | 2212423 | + | gene-QOZ80_9AG0672230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 124,768.05 Da | 32.13 | 87.60 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 821 | 1098 | 9.31922E-51 | - |
| Pfam | PF00069 | Protein kinase domain | 22 | 303 | 1.7E-46 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 936 | 974 | 4.7E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 895 | 930 | 2.6E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 821 | 846 | 0.28 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1021 | 1058 | 8.6E-7 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 356 | 637 | 3.9E-31 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 639 | 1.83E-53 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 821 | 1096 | 8.55E-62 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 305 | 8.75E-65 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 661 | 755 | 1.05E-12 | IPR008962 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 323 | 426 | 3.0E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 94 | 6.9E-23 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 660 | 796 | 1.9E-15 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 321 | 8.7E-45 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 815 | 1101 | 1.5E-86 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 650 | 7.8E-41 | - |
| SMART | SM00320 | WD40_4 | 891 | 930 | 4.4E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 811 | 846 | 0.78 | IPR001680 |
| SMART | SM00320 | WD40_4 | 934 | 974 | 5.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 976 | 1016 | 18.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1019 | 1058 | 7.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1061 | 1099 | 410.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 849 | 888 | 0.061 | IPR001680 |
| SMART | SM00220 | serkin_6 | 21 | 306 | 2.2E-21 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1026 | 1058 | 11.312864 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 941 | 983 | 13.750016 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 941 | 979 | 10.838322 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 311 | 36.68269 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 898 | 930 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1026 | 1067 | 14.117617 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 647 | 30.082111 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 898 | 930 | 12.103769 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 158 | 170 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 917 | 931 | 5.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1045 | 1059 | 5.2E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 961 | 975 | 5.2E-6 | IPR020472 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04570.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 40. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_039823349.1 | uncharacterized protein LOC120685466 isoform X5 [Panicum virgatum] | 0 |
| Q9SYS3 | Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana OX=3702 GN=CRK40 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0PCA0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG173301 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_8BG0645030, gene-QOZ80_9AG0672230 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049245 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G005400, Tel3E01G846300 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG003560 |
| Poaceae | Triticum aestivum | 6 | TraesCS1B02G294900.1, TraesCS1D02G284700.1 ... |