Basic Information
Locus ID:
gene-QOZ80_9AG0670310
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9A | 434606 | 437617 | - | gene-QOZ80_9AG0670310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 93,810.72 Da | 63.88 | 65.75 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 397 | 430 | 4.7E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 668 | 701 | 0.26 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 489 | 524 | 1.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 530 | 566 | 7.3E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 391 | 704 | 2.75E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 383 | 717 | 6.4E-60 | IPR015943 |
| SMART | SM00320 | WD40_4 | 484 | 524 | 1.8E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 527 | 566 | 8.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 568 | 607 | 3.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 661 | 702 | 0.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 620 | 660 | 4.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 391 | 430 | 9.4E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 491 | 527 | 11.73468 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 398 | 431 | 14.919653 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 491 | 533 | 14.719144 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 398 | 431 | 12.314676 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 533 | 567 | 12.881143 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 533 | 567 | 10.706503 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 511 | 525 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 553 | 567 | 2.6E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 511 | 525 | 2.6E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 417 | 431 | 2.6E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 790 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 768 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 134 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15470.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_025828580.1 | uncharacterized protein LOC112903529 [Panicum hallii] | 0 |
| Q5JSH3 | WD repeat-containing protein 44 OS=Homo sapiens OX=9606 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SUJ1 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_51839 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology