Basic Information
Locus ID:
gene-QOZ80_8BG0666280
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 60487102 | 60488127 | - | gene-QOZ80_8BG0666280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 36,479.92 Da | 36.84 | 84.81 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 42 | 135 | 1.00294E-10 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 168 | 276 | 7.7E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 151 | 278 | 1.14E-24 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 41 | 147 | 1.08E-12 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 19 | 144 | 8.8E-10 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 146 | 307 | 1.9E-44 | IPR011333 |
| SMART | SM00225 | BTB_4 | 172 | 278 | 7.4E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 172 | 239 | 15.907503 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 16 | 155 | 8.654541 | IPR002083 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002444733.2 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T0V8 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48156 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology