halophFGD

Basic Information

Locus ID: gene-QOZ80_8BG0666270

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: atbpm1,bpm1

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8B	60481385	60482101	-	gene-QOZ80_8BG0666270

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.22	25,769.18 Da	37.10	88.40	-0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	22	147	4.36802E-9	IPR002083
Pfam	PF00651	BTB/POZ domain	170	208	4.6E-9	IPR000210
SUPERFAMILY	SSF54695	POZ domain	158	210	1.49E-12	IPR011333
SUPERFAMILY	SSF49599	TRAF domain-like	34	151	4.41E-12	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	153	223	6.4E-15	IPR011333
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	19	150	1.7E-8	IPR008974
ProSiteProfiles	PS50097	BTB domain profile.	178	238	11.626329	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G03740.1	BTB-POZ and MATH domain 4.
RefSeq	XP_052166407.1	BTB/POZ and MATH domain-containing protein 1-like [Oryza glaberrima]
Swiss-Prot	Q9SRV1	BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1
TrEMBL	A2YX79	Speckle-type POZ protein-like protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29947 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene-QOZ80_8BG0666270.