Basic Information
Locus ID:
gene-QOZ80_8BG0666250
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 60466036 | 60466698 | - | gene-QOZ80_8BG0666250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 24,245.51 Da | 43.51 | 84.27 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 179 | 220 | 1.01101E-4 | - |
| Pfam | PF00651 | BTB/POZ domain | 62 | 175 | 1.4E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 52 | 175 | 4.91E-31 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 40 | 208 | 3.5E-49 | IPR011333 |
| SMART | SM00225 | BTB_4 | 69 | 178 | 3.9E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 69 | 136 | 19.030485 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025875802.1 | BTB/POZ and MATH domain-containing protein 2-like [Oryza sativa Japonica Group] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A3BUZ7 | Putative speckle-type POZ protein(Spop) OS=Oryza sativa subsp. japonica OX=39947 GN=OJ1186_G01.26 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0637750, gene-QOZ80_8BG0666250 |