Basic Information
Locus ID:
gene-QOZ80_8BG0661380
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 56833528 | 56839417 | - | gene-QOZ80_8BG0661380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 72,315.56 Da | 38.05 | 92.45 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 330 | 602 | 2.4E-44 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 181 | 2.3E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 3.8E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 310 | 603 | 7.55E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 194 | 1.93E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 211 | 6.6E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 621 | 6.3E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 403 | 1.7E-33 | - |
| SMART | SM00220 | serkin_6 | 327 | 602 | 6.1E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 327 | 612 | 35.438896 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 446 | 458 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 333 | 355 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 168 | 181 | 7.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 123 | 136 | 7.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 245 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002445573.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Sorghum bicolor] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811PS22 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS29655 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology