Basic Information
Locus ID:
gene-QOZ80_8BG0658480
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 52195058 | 52203268 | + | gene-QOZ80_8BG0658480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 81,002.19 Da | 39.48 | 86.23 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 634 | 669 | 0.2 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 74 | 270 | 1.4E-19 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 501 | 537 | 0.0017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 427 | 454 | 0.072 | IPR001680 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 292 | 379 | 4.0E-7 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 294 | 5.33E-49 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 418 | 706 | 1.78E-41 | IPR036322 |
| SUPERFAMILY | SSF49354 | PapD-like | 276 | 391 | 5.76E-11 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 288 | 423 | 3.2E-14 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 85 | 287 | 6.5E-40 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 424 | 712 | 9.1E-65 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 84 | 3.7E-13 | - |
| SMART | SM00320 | WD40_4 | 541 | 581 | 0.35 | IPR001680 |
| SMART | SM00320 | WD40_4 | 459 | 494 | 85.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 497 | 537 | 2.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 414 | 454 | 0.52 | IPR001680 |
| SMART | SM00320 | WD40_4 | 630 | 669 | 2.9E-4 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 278 | 17.432182 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 637 | 669 | 9.203785 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 637 | 669 | 10.976305 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 289 | 423 | 11.171585 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 504 | 537 | 8.637032 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 548 | 584 | 8.870959 | IPR001680 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 34 | 57 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65800.1 | receptor kinase 2. encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures. | 0 |
| RefSeq | XP_003577688.2 | uncharacterized protein LOC100831776 isoform X2 [Brachypodium distachyon] | 0 |
| Q9S972 | Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana OX=3702 GN=SD16 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0Q3EN21 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100831776 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH04.905 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8BG0658480 |
| Poaceae | Triticum aestivum | 4 | TraesCS3B02G095200.2, TraesCS3B02G095300.2 ... |