Basic Information
Locus ID:
gene-QOZ80_8BG0657720
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 50238360 | 50239235 | - | gene-QOZ80_8BG0657720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 32,344.94 Da | 43.17 | 93.44 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 161 | 270 | 5.2E-11 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 162 | 272 | 1.41E-15 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 33 | 134 | 2.01E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 132 | 291 | 7.9E-27 | IPR011333 |
| SMART | SM00225 | BTB_4 | 161 | 274 | 9.4E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 161 | 231 | 12.805203 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025822390.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T484 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_49379 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology