Basic Information
Locus ID:
gene-QOZ80_8BG0652420
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 17493658 | 17496672 | + | gene-QOZ80_8BG0652420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 54,337.79 Da | 47.98 | 82.94 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 36 | 71 | 2.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 77 | 2.49E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 152 | 388 | 2.55E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 128 | 272 | 1.1E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 28 | 78 | 9.7E-8 | - |
| SMART | SM00256 | fbox_2 | 39 | 78 | 1.9E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 33 | 69 | 10.239312 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 260 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66310.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_008678200.1 | uncharacterized protein LOC103652997 isoform X1 [Zea mays] | 0 |
| Q9C8Y6 | FBD-associated F-box protein At1g66310 OS=Arabidopsis thaliana OX=3702 GN=At1g66310 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SBV9 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_58050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology