Basic Information
Locus ID:
gene-QOZ80_8BG0651020
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
protein heterodimerization activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 13453062 | 13454585 | + | gene-QOZ80_8BG0651020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 57,177.75 Da | 42.11 | 85.25 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 74 | 111 | 3.1E-8 | IPR001810 |
| Pfam | PF00646 | F-box domain | 17 | 47 | 0.0018 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 68 | 120 | 4.45E-14 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 62 | 1.31E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 73 | 113 | 9.2E-9 | - |
| SMART | SM00256 | fbox_2 | 75 | 116 | 8.3E-4 | IPR001810 |
| SMART | SM00256 | fbox_2 | 17 | 60 | 0.087 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 59 | 11.087133 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 69 | 120 | 8.59666 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034594807.1 | uncharacterized protein LOC117856583 [Setaria viridis] | 0 |
| TrEMBL | A0A5J9VEZ8 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_16474 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 15 | AH02.4407, AH02.4459, BH01.1168, BH02.4439, BH02.4440 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_1AG0045470, gene-QOZ80_1AG0045480 ... |
| Poaceae | Oryza coarctata | 4 | Oco01G002080, Oco02G002070, Oco02G002100, Oco02G003320 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g05880.1, LOC_Os01g05890.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_01G264100, gene-BS78_03G398000, gene-BS78_K095000 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0205593, Pt_Chr0205600, Pt_Chr0205696 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G830700 |
| Poaceae | Triticum aestivum | 2 | TraesCS7B02G392200.1.cds1, TraesCSU02G244400.1.cds1 |
| Poaceae | Zea mays | 2 | Zm00001eb298720_P001, Zm00001eb298750_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-10900 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g9325 |