Basic Information
Locus ID:
gene-QOZ80_8BG0650900
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 13046038 | 13048697 | + | gene-QOZ80_8BG0650900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 42,642.83 Da | 54.09 | 82.03 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 146 | 3.80352E-26 | IPR002083 |
| Pfam | PF00917 | MATH domain | 43 | 144 | 9.4E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 175 | 251 | 1.5E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 148 | 1.8E-28 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 269 | 6.02E-25 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 20 | 148 | 9.9E-25 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 149 | 276 | 7.0E-30 | IPR011333 |
| SMART | SM00225 | BTB_4 | 183 | 284 | 6.7E-15 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 183 | 252 | 18.678892 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 21 | 145 | 17.731714 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039771080.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W4U3 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08936 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4BG0354030, gene-QOZ80_8AG0623140 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G002180 |