Basic Information
Locus ID:
gene-QOZ80_8BG0650750
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 12774323 | 12775267 | - | gene-QOZ80_8BG0650750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 34,964.80 Da | 46.99 | 78.31 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 34 | 164 | 1.38293E-20 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 212 | 312 | 1.2E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 31 | 169 | 9.97E-26 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 209 | 313 | 5.34E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 190 | 312 | 3.8E-18 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 168 | 6.8E-23 | IPR008974 |
| SMART | SM00225 | BTB_4 | 214 | 313 | 1.4E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 214 | 278 | 10.964505 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 32 | 163 | 16.453239 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G21010.1 | BTB-POZ and MATH domain 5. | 0 |
| RefSeq | XP_025822267.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 0 |
| Q1EBV6 | BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W3Q4 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08957 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH08.727, CH08.853 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_8AG0622660, gene-QOZ80_8AG0623230 ... |