Basic Information
Locus ID:
gene-QOZ80_8BG0650740
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 12734101 | 12734733 | - | gene-QOZ80_8BG0650740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 22,581.34 Da | 33.00 | 79.33 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 41 | 155 | 1.9318E-18 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 157 | 7.85E-23 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 20 | 158 | 4.1E-22 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 20 | 154 | 17.297031 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_003573575.1 | BTB/POZ and MATH domain-containing protein 1 [Brachypodium distachyon] | 0 |
| TrEMBL | A0A5J9W3Q4 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08957 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH08.727, CH08.853 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_8AG0622660, gene-QOZ80_8AG0623230 ... |