Basic Information
Locus ID:
gene-QOZ80_8BG0650670
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 12561906 | 12562946 | - | gene-QOZ80_8BG0650670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 38,933.38 Da | 35.45 | 94.33 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 165 | 276 | 4.7915E-46 | - |
| CDD | cd00121 | MATH | 4 | 133 | 7.17013E-17 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 165 | 278 | 1.9E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 3 | 139 | 8.5E-22 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 151 | 279 | 2.94E-28 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 147 | 274 | 2.9E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 278 | 345 | 4.3E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 3 | 138 | 1.4E-20 | IPR008974 |
| SMART | SM00225 | BTB_4 | 172 | 279 | 2.0E-27 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 172 | 237 | 17.520699 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 3 | 133 | 13.870719 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_021320054.1 | BTB/POZ and MATH domain-containing protein 1-like isoform X2 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9HAG6 | Speckle-type POZ protein-like protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology