Basic Information
Locus ID:
gene-QOZ80_8BG0650660
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 12522368 | 12523175 | - | gene-QOZ80_8BG0650660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 26,359.51 Da | 44.37 | 87.59 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 13 | 143 | 3.6662E-18 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 148 | 4.41E-22 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 12 | 146 | 3.2E-18 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 12 | 142 | 14.228692 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021321498.1 | BTB/POZ and MATH domain-containing protein 2 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9W3W2 | ULP_PROTEASE domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09023 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH08.700, BH08.747, CH08.832, CH09.1648 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0622370, gene-QOZ80_8BG0650660 |