Basic Information
Locus ID:
gene-QOZ80_8BG0650640
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 12502062 | 12502916 | - | gene-QOZ80_8BG0650640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 31,875.68 Da | 41.62 | 96.69 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 15 | 138 | 6.30787E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 167 | 278 | 1.2E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 157 | 276 | 2.75E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 146 | 6.21E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 142 | 5.6E-12 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 143 | 284 | 1.4E-37 | IPR011333 |
| SMART | SM00225 | BTB_4 | 175 | 280 | 2.1E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 175 | 242 | 16.672737 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_037447994.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9SJF7 | BTB domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0622350, gene-QOZ80_8BG0650640 |