halophFGD

Basic Information

Locus ID: gene-QOZ80_8BG0650630

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: Broad-Complex, Tramtrack and Bric a brac

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8B	12471408	12472288	+	gene-QOZ80_8BG0650630

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.25	29,281.13 Da	37.01	82.72	-0.36

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	28	91	8.07274E-5	IPR002083
Pfam	PF00651	BTB/POZ domain	86	190	2.8E-17	IPR000210
SUPERFAMILY	SSF54695	POZ domain	93	189	3.69E-16	IPR011333
SUPERFAMILY	SSF49599	TRAF domain-like	27	103	3.43E-10	-
Gene3D	G3DSA:1.25.40.420	-	191	255	5.8E-14	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	69	190	3.4E-19	IPR011333
SMART	SM00225	BTB_4	83	191	1.4E-9	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	81	149	11.915877	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
RefSeq	XP_044325208.1	BTB/POZ and MATH domain-containing protein 2-like [Triticum aestivum]
Swiss-Prot	Q717B2	TD and POZ domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tdpoz2 PE=2 SV=2
TrEMBL	A0A5J9W599	BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08910 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_8AG0622340, gene-QOZ80_8BG0650630