Basic Information
Locus ID:
gene-QOZ80_8BG0650490
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 12205371 | 12206920 | - | gene-QOZ80_8BG0650490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 32,906.06 Da | 35.91 | 95.19 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 111 | 222 | 9.9E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 18 | 87 | 2.34E-9 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 97 | 221 | 7.85E-30 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 223 | 290 | 5.9E-20 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 95 | 218 | 1.0E-35 | IPR011333 |
| SMART | SM00225 | BTB_4 | 119 | 224 | 8.9E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 119 | 182 | 17.003649 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039816596.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0QWT5 | Speckle-type POZ protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG126800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology