Basic Information
Locus ID:
gene-QOZ80_8BG0650060
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 11625437 | 11625970 | + | gene-QOZ80_8BG0650060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 19,505.00 Da | 52.81 | 85.93 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 149 | 2.0726E-31 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 151 | 2.78E-32 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 151 | 2.8E-30 | IPR008974 |
| SMART | SM00061 | math_3 | 26 | 131 | 0.0013 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 21 | 148 | 24.226366 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_004974316.1 | BTB/POZ and MATH domain-containing protein 3 [Setaria italica] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811M832 | BTB/POZ and MATH domain-containing protein 3-like OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS231 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH08.879 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_6AG0509720, gene-QOZ80_8AG0617850 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032442 |
| Poaceae | Oryza coarctata | 1 | Oco16G004250 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G926700, Tel2E01G926900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG075810, gene_TRIDC2AG075860 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G543300.1.cds1, TraesCS2A02G543600.1.cds1 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g22657 |