Basic Information
Locus ID:
gene-QOZ80_8BG0648220
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 6575921 | 6577287 | + | gene-QOZ80_8BG0648220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 34,078.77 Da | 55.79 | 89.70 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 34 | 80 | 4.6E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 33 | 85 | 5.23E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 116 | 273 | 1.29E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 87 | 288 | 3.9E-18 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 27 | 80 | 6.8E-12 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 31 | 79 | 10.954661 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039853249.1 | putative F-box/LRR-repeat protein 22 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9W5K5 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_09670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 8 | AH08.560, AH08.563, BH08.599, BH08.609, BH08.611, CH06.2084 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0620410, gene-QOZ80_8BG0648220 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G076300, gene-BS78_07G093000 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G010490 |
| Poaceae | Zea mays | 2 | Zm00001eb386430_P003, Zm00001eb386440_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g23738 |