Basic Information
Locus ID:
gene-QOZ80_8BG0646640
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 4341200 | 4342651 | + | gene-QOZ80_8BG0646640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 52,797.80 Da | 48.91 | 73.52 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 433 | 473 | 9.5E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 423 | 479 | 2.86E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 410 | 480 | 5.1E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 434 | 473 | 1.1E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 434 | 474 | 11.36805 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 199 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 0 |
| TrEMBL | A0A2S3I0K8 | RING-type domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G051500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology