Basic Information
Locus ID:
gene-QOZ80_8BG0646630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 4328342 | 4329697 | + | gene-QOZ80_8BG0646630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 49,300.35 Da | 55.41 | 74.68 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 400 | 440 | 7.4949E-7 | - |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 400 | 439 | 1.3E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 399 | 444 | 1.06E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 393 | 443 | 2.7E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 400 | 439 | 6.0E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 400 | 440 | 11.132002 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 175 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 0 |
| TrEMBL | A0A5J9W516 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09457 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology