Basic Information
Locus ID:
gene-QOZ80_8BG0645030
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 2846804 | 2855898 | + | gene-QOZ80_8BG0645030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 83,618.56 Da | 29.41 | 85.48 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 398 | 597 | 1.8E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 22 | 300 | 1.1E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 597 | 2.08E-45 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 304 | 9.44E-66 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 619 | 725 | 8.88E-16 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 628 | 2.1E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 92 | 4.5E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 405 | 5.4E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 329 | 2.0E-48 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 629 | 731 | 2.4E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 625 | 660 | 0.48 | IPR001680 |
| SMART | SM00320 | WD40_4 | 663 | 702 | 0.29 | IPR001680 |
| SMART | SM00220 | serkin_6 | 21 | 302 | 2.1E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 602 | 18.930386 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 308 | 35.97599 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 157 | 169 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 342 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45860.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 4. Encodes a cysteine-rich receptor-like protein kinase. Involved in programmed cell death and defense response to pathogen. | 0 |
| RefSeq | XP_039823349.1 | uncharacterized protein LOC120685466 isoform X5 [Panicum virgatum] | 0 |
| Q9LZU4 | Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana OX=3702 GN=CRK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0PCA0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG173301 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_8BG0645030, gene-QOZ80_9AG0672230 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049245 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G005400, Tel3E01G846300 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG003560 |
| Poaceae | Triticum aestivum | 6 | TraesCS1B02G294900.1, TraesCS1D02G284700.1 ... |