Basic Information
Locus ID:
gene-QOZ80_8BG0644830
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8B | 2694922 | 2696710 | + | gene-QOZ80_8BG0644830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 32,381.65 Da | 55.55 | 65.89 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 18 | 61 | 3.4E-4 | IPR001810 |
| Pfam | PF14299 | Phloem protein 2 | 110 | 289 | 8.1E-35 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 73 | 1.57E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 87 | 6.9E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 14 | 60 | 8.914593 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 244 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02250.1 | phloem protein 2-B2. | 0 |
| RefSeq | XP_039852836.1 | F-box protein PP2-B10-like [Panicum virgatum] | 0 |
| Q9ZVR5 | Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2 | 0 | |
| TrEMBL | A0A5J9W5V4 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_09793 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology